PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV90201

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MIKC_MADS

Protein Properties

Length: 248aa MW: 28845.7 Da PI: 8.674

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90201	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.4	1.4e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s OIV90201 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCS 59 79***********************************************96 PP
2	K-box	100.8	1.9e-33	81	175	6	100
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ +++ ++s+++e+ kLk++ e+Lqr+qR+llGedL++L+ k+L+qLe+qL++slk++Rs+K++++l+q+++lq+ke++l e+n+ L +klee OIV90201 81 VNKPSKELEQSSYREYLKLKARFESLQRTQRNLLGEDLGPLNTKDLEQLERQLDSSLKHVRSTKTQFMLDQLSDLQNKEQMLVETNRGLAMKLEE 175 5566777899**********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFST RGKLYEFCSC 60 TSGMVKTLER YQKCSYGAVE VNKPSKELEQ SSYREYLKLK ARFESLQRTQ RNLLGEDLGP 120 LNTKDLEQLE RQLDSSLKHV RSTKTQFMLD QLSDLQNKEQ MLVETNRGLA MKLEEINSRN 180 QYRQWDDGEQ SMQYDTQNAH SQGFFQPLEC NPTLQIGTDY RYHHVAQDQL NATTQAQQVN 240 GFIPGWML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	1e-122	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	OIV90201