PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV90281

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 226aa MW: 26124.1 Da PI: 6.6769

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90281	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.4	5.1e-18	31	83	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LAk l+L+ rqV +WFqNrRa++k OIV90281 31 KKRLNLEQVKALEKSFEIGNKLEPERKMQLAKALSLQPRQVAIWFQNRRARWK 83 4568889*********************************************9 PP
2	HD-ZIP_I/II	126.1	1.6e-40	29	121	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekk+rl+ eqvk+LE+sFe +kLeperK++la++L lqprqva+WFqnrRAR+ktkqlE++ye+Lk++++alk++n++L++++++L+ el++ OIV90281 29 EKKKRLNLEQVKALEKSFEIGNKLEPERKMQLAKALSLQPRQVAIWFQNRRARWKTKQLEREYEVLKKQFEALKADNDNLKAQNQKLHGELQA 121 69**************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MSFSGIENKQ CDEVHGDDEL SDDGSQLGEK KKRLNLEQVK ALEKSFEIGN KLEPERKMQL 60 AKALSLQPRQ VAIWFQNRRA RWKTKQLERE YEVLKKQFEA LKADNDNLKA QNQKLHGELQ 120 ALKSTDCFET GTISFKKETD QGSWSNRSDN SSNINLDLSR TPVMNSPVSC QNAKNLLPNS 180 LKPTSITQLL QCSSRSDLQE ESFTNIFHNI DEQQNFWPWP EQNHFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	78	86	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15150.1	5e-61	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIV90281