PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV90477
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 156aa    MW: 18165.4 Da    PI: 10.3348
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV90477genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF41.91.3e-131148340
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
              i++   r+ tf kR++gi+KK +EL vLC+++ + ii 
  OIV90477 11 INDVNARKATFRKRKKGIMKKVNELTVLCGIQGCAIIQ 48
              6777889*************************999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MTRKKVKVAY INDVNARKAT FRKRKKGIMK KVNELTVLCG IQGCAIIQNP FDSQIEVWPN  60
PKGAKKVVER YMSTSKVDET KNMNQESFFV QRISKLQGKL NKLRSENREK EMALAMLEYF  120
QTKKLPENLT LTDLKEMEKL IEQCVKETEN KMVTLC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKVAYINDVNARKATFRKRK
22226RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.24e-34M-type_MADS family protein