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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIV90633 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 261aa MW: 30584.6 Da PI: 7.6595 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 55.1 | 1.8e-17 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+W +eEd+ll+++v+++G g+W+++ar g++R +k+c++rw +yl
OIV90633 22 KGPWIAEEDKLLIQYVEEHGEGRWNSVARIAGLKRNGKSCRLRWVNYL 69
79********************************************97 PP
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| 2 | Myb_DNA-binding | 52.8 | 9.2e-17 | 75 | 119 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg T++E+ +++++++++G++ W+tIar ++ gRt++++k++w+++
OIV90633 75 RGQITPQEESIIIELHALWGNR-WSTIARSLP-GRTDNEIKNYWRTH 119
7888******************.*********.************97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 261 aa Download sequence |
MFREVMEGKM GWGIIEEEGW RKGPWIAEED KLLIQYVEEH GEGRWNSVAR IAGLKRNGKS 60 CRLRWVNYLR PDLKRGQITP QEESIIIELH ALWGNRWSTI ARSLPGRTDN EIKNYWRTHF 120 KKKTKTPSDA AEKAKTRLLK RQQFQQLQQQ QQLKQHQLQQ QQLQFNLDMK NIMNMFEENV 180 HMVPSTSEET QEILNNIYPN TTPYEEGYFY SMLNGNASAP TSSNEETLWD GLWNFDDVLY 240 NFSAASVPSK ASMHNLVAPF C |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G24310.1 | 5e-81 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIV90633 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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