PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV90677

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 77aa MW: 8821.78 Da PI: 7.4408

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90677	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.7e-05	32	54	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F + L H++ H OIV90677 32 YECTYCKRGFANAQALGGHMNIH 54 99*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 77 aa Download sequence
MNSEKLVSCE ISSEETDQQE AQDGIEETKR SYECTYCKRG FANAQALGGH MNIHRKDRAK 60 AKKEVTQFFN PNKQIHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53820.1	2e-15	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV90677