PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV90877
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 246aa    MW: 28342.9 Da    PI: 10.054
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV90877genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF53.23.7e-171051243
              ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
    SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
              +i n+s r+ t+ kR++g+lKK  ELS+LC++e++ i++s+ 
  OIV90877 10 FILNDSARKATYKKRKKGLLKKVDELSTLCGIEACAIVYSPY 51
              789*************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MTRKKVKLAF ILNDSARKAT YKKRKKGLLK KVDELSTLCG IEACAIVYSP YEQQPEVWPS  60
PWGVQRVLSK FRNMPELEQS KKMVNQEIFL KQRILKAKEQ VKKLRKENRE KEMTQLMFQC  120
LSAGKILHNN LNMIDLNDLA WLIDQNLKDI GRRMETLEKN GQVTQSQSHM AAPPPPQQQP  180
PALPSRVAKN EEMTLMDHGH GLEMNAETVP RQWFMDMMNG NGNGNETMPF GETNLQNGFW  240
PNPLLP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAFILNDSARKATYKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.11e-60M-type_MADS family protein