PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV90919

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 277aa MW: 31561 Da PI: 6.9232

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV90919	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.0001	36	57	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C C+k Fs++++L H+r H OIV90919 36 TCYLCKKNFSSSHSLFGHMRIH 57 699*****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MKSTFSKASS STNYYKNKDV CDDDSNNNGD NGKKRTCYLC KKNFSSSHSL FGHMRIHSDR 60 PWRGVRPPIH SHHHNDKHIS SGFEEDHDDE YDEVVASDID ISKSSSLLRW QKTGKRGRKS 120 SNVYQAAEIL MYMSSRSNDF LDIKSMMGEP KNHQPSTISC KRKNIAEASI SEIKKNFESM 180 NVEDAIHDHI HNLVKKLKVP PHNKEKNNIV DMVESKFSYY AITQDAIVRG STMEAINNNE 240 VQTEKDTSSS QFLGPKILDF DLNMSPPHDD LDDGENC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26940.1	1e-10	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV90919