PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV91068
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 157aa    MW: 18111 Da    PI: 10.4265
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV91068genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF43.44.5e-141147339
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEE CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevavii 39
              i ++s r+ tf kR++gi+KK +EL +LC+++++ +i
  OIV91068 11 ITDQSARKATFKKRQKGIMKKVSELTTLCGIQACAMI 47
              899*******************************877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MTRKKVTLAY ITDQSARKAT FKKRQKGIMK KVSELTTLCG IQACAMIWNP FDAQTEVWPD  60
PEGAKQLIKR YQETSLKDET KNLNQESFTR QRITKAKDQL NKLRKENREK GTAQAIMHYI  120
QTRKLPQNPT ITDLKDMDTL VEKYLTDINS KMAALGS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1326RKKVTLAYITDQSARKATFKKRQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.21e-35M-type_MADS family protein