PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV91282

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 551aa MW: 59349.5 Da PI: 8.798

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV91282	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.00042	72	94	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ OIV91282 72 WKCEKCSKKYAVQSDWKAHSKTC 94 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MAASSSSASL FGFREEDQNQ NQLNQQQHSS SATPAALPQK KKRNQPGTPS KALGDLTGIK 60 KHYSRKHGEK KWKCEKCSKK YAVQSDWKAH SKTCGTREYR CDCGTLFSRR DSFITHRAFC 120 DALAQESARQ PPNLISNANI GSTSHLYGTN NSNMALAFSH VATQMSNMQD QINNNHSTDM 180 LGLGGNPGRT GQFDHILHPS LQAGSSSFKP SQQTMHHSPA SFFMSSDNLN QNYHHPDQSQ 240 QQQQQQGLVQ QNKVPFQGLM HLSHDGLNNH HNNSPSPGGS ANLFSHPFLS SNNSTNSSNN 300 SFSEHFNNAN GSVMGGNEAT NFFTTSNAIM GGGHHQQTIT SSAPSLFSTS LQSNTSAANT 360 HHMSATALLQ KVAQMSAISS NNTTSLLKSF GSSTSSSSGS KTEQHRPIHV PALPPATNYS 420 SIFGGNENSN NNLQDLMNSF AASGNSSIFE HSSSVGFTGF EPYDHNSNRS REQPKLHGVK 480 IGTGSDDRLT RDFLGVGATV RSISGGNGGI VSQREQHGHG GGFNLSNTLE AETNNDAVPS 540 RQAFGGNFFS E

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MAASSSSASL FGFREEDQNQ NQLNQQQHSS SATPAALPQK KKRNQPGTPS KALGDLTGIK  60
KHYSRKHGEK KWKCEKCSKK YAVQSDWKAH SKTCGTREYR CDCGTLFSRR DSFITHRAFC  120
DALAQESARQ PPNLISNANI GSTSHLYGTN NSNMALAFSH VATQMSNMQD QINNNHSTDM  180
LGLGGNPGRT GQFDHILHPS LQAGSSSFKP SQQTMHHSPA SFFMSSDNLN QNYHHPDQSQ  240
QQQQQQGLVQ QNKVPFQGLM HLSHDGLNNH HNNSPSPGGS ANLFSHPFLS SNNSTNSSNN  300
SFSEHFNNAN GSVMGGNEAT NFFTTSNAIM GGGHHQQTIT SSAPSLFSTS LQSNTSAANT  360
HHMSATALLQ KVAQMSAISS NNTTSLLKSF GSSTSSSSGS KTEQHRPIHV PALPPATNYS  420
SIFGGNENSN NNLQDLMNSF AASGNSSIFE HSSSVGFTGF EPYDHNSNRS REQPKLHGVK  480
IGTGSDDRLT RDFLGVGATV RSISGGNGGI VSQREQHGHG GGFNLSNTLE AETNNDAVPS  540
RQAFGGNFFS E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	40	73	KKKRNQPGTPSKALGDLTGIKKHYSRKHGEKKWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	2e-41	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV91282