PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV91441

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 929aa MW: 102680 Da PI: 8.9577

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV91441	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.2	0.00013	56	77	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +C++ F ++ n++rHir+H OIV91441 56 KCDKCSREFCSPINYRRHIRVH 77 7********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 929 aa Download sequence
METEDINDSL DTVIGKESIL SFPRADDNPI QWIQLLHALD QQGLPFFSPV KIRLQKCDKC 60 SREFCSPINY RRHIRVHHRL KKHDKDSKIN RDLLGAYWDK LSVEEAMELV SFRNVMLEET 120 PGSSILIALT NVVKNHIFSP LPQYYLRAGS ALLDIIESRP SSFPISSKEL FSILDDSSEK 180 TFLCGTAMSM QRYVFDGEAG KIGLEPKNLV ACTSFLLEQK LAKAWLADKD AEALRCQKLL 240 MEEEDAAQRR QARILEKKHK KKVKQKEQKA RGRFVAETEI KQNNRSTVEA VSPAEASMDA 300 RDFEAHNPDT IVSHAPSPDV TIHCTETTEV VDGGPQSRSD CVSYPNIEQQ RSQGHNHQRM 360 IVARRHELPK SQRGLSNDLH ASQNSHTPKL EVIQKSGTLH EQKESPIVTG SKVWSRKPKP 420 EIGRVMSDAR LQKEPEQGKN HEVVIGSISI PLGNCSQSEG NLVASHADCM VENLSKQNSA 480 QEKSMKTDSS QSGNPVKLWR PVSQHGTKDS TALQSGGTEA DAVYGKDDQT LSGQSSLRLC 540 NIDGSYIGSR NNLSYLGAKV DRQNFQLPSH AAKAFLAQKN NSLAGWKEAL SSNHVKLVLY 600 DDSEPPGCPE KNRRKVMWPF SRKGASGFSS SSTAQQVTDN IDATGLTAVV TGASSGIGTE 660 TTRVLALRGA HVIMGVRNMN AAKDVKEAIL KEIPSAKVDA IELDLSSLDS VKKFASEFKS 720 SGLPLNILIN NAGIMACPFA LSKDNIELQF ATNHIGHFLL TSLLLDTMKN TANTTKKEGR 780 IVNVSSEAHR FSYPGGIRFD KINDRSSYNN WRAYGQSKLA NILHANELTR RLKEDGVNIT 840 ANSLHPGAIS TNLFRHNAAV NGLINVFGKF VLKNVQQGAA TTCYVALHPQ VKGISGKYFS 900 DSNESKTTPH GTDADLAKRL WDFSMNLIK

Sequence ? help Back to Top

Protein Sequence Length: 929 aa Download sequence

METEDINDSL DTVIGKESIL SFPRADDNPI QWIQLLHALD QQGLPFFSPV KIRLQKCDKC  60
SREFCSPINY RRHIRVHHRL KKHDKDSKIN RDLLGAYWDK LSVEEAMELV SFRNVMLEET  120
PGSSILIALT NVVKNHIFSP LPQYYLRAGS ALLDIIESRP SSFPISSKEL FSILDDSSEK  180
TFLCGTAMSM QRYVFDGEAG KIGLEPKNLV ACTSFLLEQK LAKAWLADKD AEALRCQKLL  240
MEEEDAAQRR QARILEKKHK KKVKQKEQKA RGRFVAETEI KQNNRSTVEA VSPAEASMDA  300
RDFEAHNPDT IVSHAPSPDV TIHCTETTEV VDGGPQSRSD CVSYPNIEQQ RSQGHNHQRM  360
IVARRHELPK SQRGLSNDLH ASQNSHTPKL EVIQKSGTLH EQKESPIVTG SKVWSRKPKP  420
EIGRVMSDAR LQKEPEQGKN HEVVIGSISI PLGNCSQSEG NLVASHADCM VENLSKQNSA  480
QEKSMKTDSS QSGNPVKLWR PVSQHGTKDS TALQSGGTEA DAVYGKDDQT LSGQSSLRLC  540
NIDGSYIGSR NNLSYLGAKV DRQNFQLPSH AAKAFLAQKN NSLAGWKEAL SSNHVKLVLY  600
DDSEPPGCPE KNRRKVMWPF SRKGASGFSS SSTAQQVTDN IDATGLTAVV TGASSGIGTE  660
TTRVLALRGA HVIMGVRNMN AAKDVKEAIL KEIPSAKVDA IELDLSSLDS VKKFASEFKS  720
SGLPLNILIN NAGIMACPFA LSKDNIELQF ATNHIGHFLL TSLLLDTMKN TANTTKKEGR  780
IVNVSSEAHR FSYPGGIRFD KINDRSSYNN WRAYGQSKLA NILHANELTR RLKEDGVNIT  840
ANSLHPGAIS TNLFRHNAAV NGLINVFGKF VLKNVQQGAA TTCYVALHPQ VKGISGKYFS  900
DSNESKTTPH GTDADLAKRL WDFSMNLIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-110	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV91441