PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV91469

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 249aa MW: 26758.1 Da PI: 7.1295

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV91469	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117.7	1.5e-36	45	129	2	92
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.....eaesssssasnsssgkaak 92 ++++++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai e+tg+++++a ++ + +s + OIV91469 45 TPARKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIVEATGSGTIPAIAVsvggsL----KIPTS-------SD 129 67899***********************************************************99999544322210....11111.......11 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MDYTLSSDGT TMIQSPEPAV SLKEERTDTD QSLGDSIPVT LAMSTPARKP SKDRHTKVEG 60 RGRRIRMPAT CAARIFQLTR ELGHKSDGET IRWLLEHAEP AIVEATGSGT IPAIAVSVGG 120 SLKIPTSSDG EESGRKRRRA SNSEFIEVNE RGSISSGLAP IAQTCYGIPQ SGLVPLWPVS 180 MPQYWVIHAS ATPFFNLQMQ HFLGSTSTMV PSFSSCTSSA AISNPPTQKE LSFMPPSHAN 240 SEPSSTSNP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	140	GRKRRRA
2	135	139	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	4e-59	TCP family protein

Link Out ? help Back to Top
Ensembl	OIV91469