PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV91523

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 477aa MW: 51011.1 Da PI: 7.6638

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV91523	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.7	4.3e-38	88	193	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.............. 88 k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ + s + ++ + s++ OIV91523 88 IPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNLSIRTTGTTLSAPasksaphafhgala 188 5699*************************************************************999888422222222222222222222344444322 PP TCP 89 ....k 89 + OIV91523 189 lahhH 193 22220 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MELSDLQNNK NNNKNSKKKK KNENIDENPP SQPQVGPIHI MGSINHPSNS SSSNSSSSPS 60 TTTTTTTTTT TIPHQLPRSE PQLSISTIPK RSTKDRHTKV DGRGRRIRMP ATCAARVFQL 120 TRELGHKSDG ETIEWLLQQA EPAIIAATGT GTIPANFSTL NLSIRTTGTT LSAPASKSAP 180 HAFHGALALA HHHPYEEAFH HTPMLGFQHH SLLTGEPILG TSAGESSDNY MRKRFREDLF 240 KDDSNNSQNE NDHDGNASSP KHFKTNISQQ QQQHQQGGVV SSLRPSNMLP ATAMWAVAAP 300 PTTTTTPPPP PPGSTIWMLP VAGGTTSVTA APSSDTHQMW PFTASGSGGG GVGGVNPVHF 360 MPRFNLQGGG VEFQGGGRGG GGGGGALQLG SMLMQQQQQP SQHLGLAMSE SNLGMLAALN 420 AYARAGAALN INSDHQSHNH HHHMEQQQQQ HHHQHQHHHQ SHEPADSGED GGPDSSH

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MELSDLQNNK NNNKNSKKKK KNENIDENPP SQPQVGPIHI MGSINHPSNS SSSNSSSSPS  60
TTTTTTTTTT TIPHQLPRSE PQLSISTIPK RSTKDRHTKV DGRGRRIRMP ATCAARVFQL  120
TRELGHKSDG ETIEWLLQQA EPAIIAATGT GTIPANFSTL NLSIRTTGTT LSAPASKSAP  180
HAFHGALALA HHHPYEEAFH HTPMLGFQHH SLLTGEPILG TSAGESSDNY MRKRFREDLF  240
KDDSNNSQNE NDHDGNASSP KHFKTNISQQ QQQHQQGGVV SSLRPSNMLP ATAMWAVAAP  300
PTTTTTPPPP PPGSTIWMLP VAGGTTSVTA APSSDTHQMW PFTASGSGGG GVGGVNPVHF  360
MPRFNLQGGG VEFQGGGRGG GGGGGALQLG SMLMQQQQQP SQHLGLAMSE SNLGMLAALN  420
AYARAGAALN INSDHQSHNH HHHMEQQQQQ HHHQHQHHHQ SHEPADSGED GGPDSSH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	375	384	GGGRGGGGGG
2	376	385	GGGRGGGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	2e-54	TCP family protein

Link Out ? help Back to Top
Ensembl	OIV91523