PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV91598
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MIKC_MADS
Protein Properties Length: 241aa    MW: 27736.9 Da    PI: 9.794
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV91598genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.81.4e-281059251
              ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              ri+n++ rqvtfskRrng+lKKA+ELS+LCdaev +i+fsstgkly+y+s
  OIV91598 10 RIDNTTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYDYAS 59
              8***********************************************86 PP
2K-box83.73.9e-28821701098
     K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                + + + +q+e+a L+++++ Lq+ +R+l+Ge+L+ L +keLq+Le+qLe sl+ +R kK+e+l+++i+el +k + +++en +L+kk+
  OIV91598  82 PTLEIKFWQREAASLRQQLQYLQECHRQLMGEQLSGLGIKELQNLENQLEMSLRGVRVKKDEILTDEINELHRKGNLVHQENVELHKKM 170
               5567899********************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MGRGKIAIRR IDNTTSRQVT FSKRRNGLLK KAKELSILCD AEVGLIVFSS TGKLYDYAST  60
SMKSVLERYK KLKEESYQQM NPTLEIKFWQ REAASLRQQL QYLQECHRQL MGEQLSGLGI  120
KELQNLENQL EMSLRGVRVK KDEILTDEIN ELHRKGNLVH QENVELHKKM DFVHKENAKL  180
QKKVFEAGVN EENVASDPPY TITDGYDLHA PISLQLSQSR TQYSQLPAKA IKLGYSLKLI  240
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.15e-97MIKC_MADS family protein