PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV91827
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 225aa    MW: 25521 Da    PI: 9.7438
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV91827genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF37.53.1e-12651348
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
              i ++s+r  t+  R+ g+ KK +E+S+LC+++++ ii++++ ++ e
  OIV91827  6 IVDESKRRATYRVRKVGMKKKLQEISTLCGIQACGIIYGPNETVPE 51
              67899************************************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MKPQYIVDES KRRATYRVRK VGMKKKLQEI STLCGIQACG IIYGPNETVP EVWPSHSEVQ  60
RVINRFYAMS EIDQKKNMLT QESFLKQNFR KVQDQLKKAR DENKKKEMEL LMFHCLGSGR  120
IVHSADTIDM NYFLLVINQN LRGVNGKKST DQPQHGIGVS SNGTENLNGE RIIVDGLNQG  180
IVQTNIGAMQ RQGWSSDSTR GRGNAMFPFG DYNHSSGLEH DPSFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-35M-type_MADS family protein