PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV92112

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 165aa MW: 18581.8 Da PI: 10.1793

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV92112	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00022	33	55	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H+ +H OIV92112 33 FECKTCNRKFSSFQALGGHMTSH 55 89******************998 PP
2	zf-C2H2	14.4	0.00011	83	105	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++Cg+ Fs L H+++H OIV92112 83 HKCSICGQEFSLGQALGGHMKRH 105 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MKRQRDIEVL ESIDLANCVM LLTHPQPHNP VEFECKTCNR KFSSFQALGG HMTSHKRPKL 60 EAEETIAQAK TLTLTLGHKP KFHKCSICGQ EFSLGQALGG HMKRHRGAIN EDVSSIKKVV 120 VAKVAPVLKR SNSIRVMWLD LNFTPLENDL NLLFGKMTPK VHAFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	1e-43	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV92112