PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV92172

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 275aa MW: 31200.2 Da PI: 9.2598

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV92172	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.00069	94	116	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H OIV92172 94 YECKTCNKCFPSFQALGGHRASH 116 99**********99999998887 PP
2	zf-C2H2	14	0.00015	177	199	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cg+ Fs+ L H+r+H OIV92172 177 HECYICGTEFSSGQALGGHMRRH 199 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence
MKVQDEQQQH DGDINHMQMI KFKGKRTKPQ RLPSLLRLPM PSSSIDNSEE EKDMANCLIL 60 LARGCNQQTQ KTSESYHVTT PDHNRNKKLG LYHYECKTCN KCFPSFQALG GHRASHNKPK 120 AITQDQKQGV TSFVHDRVDH YYDPTTTSTT FTLQIPNNRA LFGIKTTKTT NKCNKVHECY 180 ICGTEFSSGQ ALGGHMRRHR SFLSTTSTSK TSLSGANNNG VGESPHEFVD AKRPRNVLML 240 DLNLPAPEDD RRETKLLFQS KEKVIVFNAT LDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	4e-42	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV92172