PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV92456

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 238aa MW: 26589.7 Da PI: 9.413

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV92456	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.3e-05	51	73	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C k F++ L H+++H OIV92456 51 YTCSFCRKEFKSAQALGGHMNVH 73 9********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MKRNTLSTSY ANNYNSNKNQ MVMKEFLDCN NSHNGEDDHY MNGFPWPPRS YTCSFCRKEF 60 KSAQALGGHM NVHRRDRARL RQSSPPPTPN SDHNHHGHAH GQGHPMLNLN LNPNFSSSTS 120 SNNLSFLPPS WSSSHFSTHK PHVTSTLPLL VSPTTTTTTP SSSYSSPSSA SPSELKRWVV 180 VDGILLKNPL TTKTSEATKS KIGEDGCKIL KKSEILRMDL EIGLPREYDL DLELRLGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23130.1	2e-23	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV92456