PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV92506

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 177aa MW: 19588.1 Da PI: 8.3907

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV92506	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	145	2.2e-45	13	112	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+C+kdCv+apyfpa++p+kf vhk+FGasnv k+l++lpe++r+da+ss+vyeA+ar+rdPvyG++g i++lqqq++ l+++lal+++e OIV92506 13 PCAACKLLRRRCSKDCVFAPYFPADEPHKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCAGAISSLQQQVDVLQTQLALAQAE 112 7**********************************************************************************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MKEGGRKQGA MSPCAACKLL RRRCSKDCVF APYFPADEPH KFGSVHKVFG ASNVNKMLQE 60 LPEHQRSDAV SSMVYEANAR VRDPVYGCAG AISSLQQQVD VLQTQLALAQ AEVVHMRMHQ 120 FSASSNQHHQ SVPHVASNSS SQNLYQTSRT LSSQTKSLFG MDMVVDQTNM DHSLWSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	3e-61	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV92506