PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV92511

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 366aa MW: 41584.2 Da PI: 4.3699

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV92511	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.5e-16	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd++l+ +++ G ++W++ ++ g+ R++k+c++rw +yl OIV92511 16 RGPWSPEEDLKLIAFIQKNGHDNWRSLPKQSGLLRCGKSCRLRWINYL 63 89****************************99**********97 PP
2	Myb_DNA-binding	48.3	2.3e-15	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E+e +++++k +G++ W++Ia++++ gRt++++k+ w+++l OIV92511 69 RGNFTIQEEEAIIRLHKDFGNK-WSKIASCLP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MGKGRAPCCD KTQVKRGPWS PEEDLKLIAF IQKNGHDNWR SLPKQSGLLR CGKSCRLRWI 60 NYLRPDVKRG NFTIQEEEAI IRLHKDFGNK WSKIASCLPG RTDNEIKNVW NTHLKKRLSI 120 QSSESSTDES KLESSITSSS SSLSESLSSN DAPNLAAKTI PSNELNEQET LETMNDKIEQ 180 HSEKQISNEV ISIIEDPKEL TTSLSFVESN ILNSNHIVAF TPEQQLCSPL TNLEPYDADN 240 NNTLQEVDKP NHLNEIPWDL DDDIWKMVDN FVSMQSNEVQ LEGVPSNQIS NPIEESVQDV 300 ETMKWFHEFD NVFGLVGETN ESNKDGYLPK NYSSELGVDP QTFDLDVMES TESELDLSYI 360 QLWLMA

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MGKGRAPCCD KTQVKRGPWS PEEDLKLIAF IQKNGHDNWR SLPKQSGLLR CGKSCRLRWI  60
NYLRPDVKRG NFTIQEEEAI IRLHKDFGNK WSKIASCLPG RTDNEIKNVW NTHLKKRLSI  120
QSSESSTDES KLESSITSSS SSLSESLSSN DAPNLAAKTI PSNELNEQET LETMNDKIEQ  180
HSEKQISNEV ISIIEDPKEL TTSLSFVESN ILNSNHIVAF TPEQQLCSPL TNLEPYDADN  240
NNTLQEVDKP NHLNEIPWDL DDDIWKMVDN FVSMQSNEVQ LEGVPSNQIS NPIEESVQDV  300
ETMKWFHEFD NVFGLVGETN ESNKDGYLPK NYSSELGVDP QTFDLDVMES TESELDLSYI  360
QLWLMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	2e-80	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV92511