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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIV92709 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | ZF-HD | ||||||||
| Protein Properties | Length: 211aa MW: 24260.3 Da PI: 8.8238 | ||||||||
| Description | ZF-HD family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | ZF-HD_dimer | 47.6 | 3.8e-15 | 1 | 33 | 17 | 50 |
ZF-HD_dimer 17 lGghavDGCgEfmpsegeegtaaalkCaACgCHR 50
+G+h+vDGCgEfmps geegt+++lkCaAC+ H+
OIV92709 1 MGSHVVDGCGEFMPS-GEEGTIESLKCAACDYHK 33
7*************9.999***********9775 PP
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| 2 | Homeobox | 14.4 | 6.7e-05 | 148 | 208 | 1 | 57 |
TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
+r Rt+ft++q +++ e+ e k ++ +++e ++ ++++g+ +++ kvW +N ++ +kk
OIV92709 148 KRFRTKFTQQQKNRMMEFAEklgwKIQKQDEQELQQFSSQVGIRKQVFKVWMHNNKQAMKK 208
789************98666777778999****************************9997 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 211 aa Download sequence |
MGSHVVDGCG EFMPSGEEGT IESLKCAACD YHKKEVEGES QQHASNYQTY HPNKHNNTHN 60 IIHFPPPPPH YNDHHHNHTH LQFHTPSSSM HQQHRFSNGV GTPTSLVTPM MMPIGSGGVP 120 PESSSEDLNM FQYNSGQILV QPPTLSKKRF RTKFTQQQKN RMMEFAEKLG WKIQKQDEQE 180 LQQFSSQVGI RKQVFKVWMH NNKQAMKKQQ M |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G75240.1 | 5e-44 | ZF-HD family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIV92709 |




