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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIV92832 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | MYB | ||||||||
| Protein Properties | Length: 334aa MW: 38163.6 Da PI: 6.5082 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 52.9 | 8.7e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl
OIV92832 14 KGPWSPEEDTKLKTYIEKHGTGsNWISLPQKIGLKRCGKSCRLRWLNYL 62
79*********************************************97 PP
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| 2 | Myb_DNA-binding | 34.8 | 3.9e-11 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g +++eEd + + G++ W+ Ia+ ++ gRt++++k++w++
OIV92832 69 GGFSEEEDNVICSLYLSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
569******************.*********.***********97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 334 aa Download sequence |
MGRAPCCDKT YVKKGPWSPE EDTKLKTYIE KHGTGSNWIS LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNVIC SLYLSIGSRW SIIAAQLPGR TDNDIKNYWN TRLRKKLTGK 120 QRKDQQAQAR RVSNLKQEIK SEPEYFAGVI TQTSYWPSEH NNYMHMQVTN NHNVSNQHYD 180 LNNQTSFWNL LLNKDTVTAT FNSQVTCDVS LLQEQIYPIT MNMINPINSG SGTYLPSNIF 240 PGFENFPNDL SEQVCVNQPQ QVDGSMQGFY GIGSLDITIN NGSTNTTSTE STNWEDMNSL 300 VYSPNLASDY EGYPQEIPQD ITFEESRYFG IPMQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G49690.1 | 3e-77 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIV92832 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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