PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV93209

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 477aa MW: 53942.1 Da PI: 8.3558

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV93209	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.4	0.00047	426	448	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k F++ L H r+H OIV93209 426 FECPICYKIFKSGQALGGHKRSH 448 89******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MEERNFVCKY CSKRFPCGKS LGGHIRTHIT EERNNNNKNK NNNNGAECDN LNFDAAVRRK 60 KKRDLWSEDG YGLRENPKKT MRSVNSNGTL EQQQEEVVVE KFCKECGKGF SSLKALCGHM 120 ACHSQKQKKL VLDSESDTEE ICDVSKNPRR SKRMRFKAIS LGNNQSYSSS VPLVNGSSSV 180 SEVEQEQEEV ARCLMLLSKD CSHKGPFALV NESSENNSVV VEAEKSSHVD MRFCIKNGNK 240 FVSNGYETYD PVENKVLKLK STDNSDSGYY RYGPQAKLAK SDVANDEFKS KFENYNVESR 300 KMLNMNKGVS KYTVTSFKKS VKEDLNYDRT NGTTRKFDSK NIANYDSFDH SKKDTEYSFG 360 NDEIYETDEK GWKYESLAYD STDESDESSS DTDSLPIPKS HSKNVFNGKN TSKAKKKLKS 420 KKSKEFECPI CYKIFKSGQA LGGHKRSHFV GGSEESSMVI NQGLCFIDLN LPAPVDE

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MEERNFVCKY CSKRFPCGKS LGGHIRTHIT EERNNNNKNK NNNNGAECDN LNFDAAVRRK  60
KKRDLWSEDG YGLRENPKKT MRSVNSNGTL EQQQEEVVVE KFCKECGKGF SSLKALCGHM  120
ACHSQKQKKL VLDSESDTEE ICDVSKNPRR SKRMRFKAIS LGNNQSYSSS VPLVNGSSSV  180
SEVEQEQEEV ARCLMLLSKD CSHKGPFALV NESSENNSVV VEAEKSSHVD MRFCIKNGNK  240
FVSNGYETYD PVENKVLKLK STDNSDSGYY RYGPQAKLAK SDVANDEFKS KFENYNVESR  300
KMLNMNKGVS KYTVTSFKKS VKEDLNYDRT NGTTRKFDSK NIANYDSFDH SKKDTEYSFG  360
NDEIYETDEK GWKYESLAYD STDESDESSS DTDSLPIPKS HSKNVFNGKN TSKAKKKLKS  420
KKSKEFECPI CYKIFKSGQA LGGHKRSHFV GGSEESSMVI NQGLCFIDLN LPAPVDE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	58	63	RRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	8e-58	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV93209