PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV93330

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 177aa MW: 19438.8 Da PI: 7.5337

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV93330	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	144.8	2.4e-45	15	114	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+C++dCv+apyfp+++p+kfanvhk+FGasn+ k+l++lpe++r da+ss+vyeA+ar++dPvyG+vg i++lqqq++ l+++la++++e OIV93330 15 PCAACKLLRRRCSQDCVFAPYFPSHEPHKFANVHKVFGASNINKMLQELPEHQRGDAVSSMVYEANARVKDPVYGCVGAISSLQQQINVLQTQLAVTQAE 114 7**********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MKESGRKQSG GASSPCAACK LLRRRCSQDC VFAPYFPSHE PHKFANVHKV FGASNINKML 60 QELPEHQRGD AVSSMVYEAN ARVKDPVYGC VGAISSLQQQ INVLQTQLAV TQAEVVHLRV 120 THNASSSSLW NNNAGHNSPT NSESPSSNIM DSQAKYFFEM DMVVVDHASY GDSMWSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	2e-71	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV93330