PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV93335

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 249aa MW: 28285.7 Da PI: 9.6706

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV93335	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.0001	78	100	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F ++ L H++ H OIV93335 78 FSCKFCDKKFANSQALGGHQNAH 100 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MSDRLFVRDS WDRKLKRKIE ESSIMNKDSE LSLSLSLGSN MLQESSSKRK VYEDSSFDPK 60 LAENSNDKET IIPKEQQFSC KFCDKKFANS QALGGHQNAH RRERILSRMN KEFAMGTFGH 120 NAHMCPYSSM ANRHHPYHGA HMHPMTHMSP MPWRRFELGY GNQGLYNTSF PGHQFGMASN 180 SMGTSAQTPQ RLNHRDVGFG SELHQVPSHS EGIINRSITA PNDLEGLQGN HHARNQHIAS 240 PRPNLSLNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80730.1	9e-12	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV93335