PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV93659

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 312aa MW: 36197.6 Da PI: 6.1242

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV93659	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.6	2.2e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g W+ ++++ g+ R++k+c++rw +yl OIV93659 14 RGLWSPEEDEKLIRYITIHGYGYWSEVPEKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	52.2	1.4e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T eE++l+++++ G++ W+ Ia++++ gRt++++k++w+++ OIV93659 67 RGRFTHEEEKLIINLHGVVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89******************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT IHGYGYWSEV PEKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF THEEEKLIIN LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPW 120 VSSNTNVSKY VDYSKLDFNS NQLDHYANCK QDNLTTKLPQ VQETLFSSTC PLFMFDTSSL 180 DHGTTTLMDN NIRPYLFQDA VGLSTETWNL SHHQQVQEPF TIGLDNTNYL PPLIENVENM 240 VPIEVQSCSM NEQGDVALES LQRQELNEWV ETQQQQCPNF FFCWDNVEGQ LGGEELAPIS 300 SNMITNTLPS FP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63910.1	1e-92	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV93659