PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV93842

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 303aa MW: 33765.2 Da PI: 8.8721

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV93842	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.7e-05	122	141	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ OIV93842 122 FSCSVCNKMFNRFNNMQMHM 141 89*****************9 PP
2	zf-C2H2	13.9	0.00016	207	229	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F + + ++H +++ OIV93842 207 FGCRKCGKPFAVRGDWRTHEKNC 229 56*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MQTHSFSYIS SSNGSSSNNA FFEADEVDDE ASIFLSLGPP GQHNPKPMSS LNHSTTTLCQ 60 AQNPTICDDH SGITVALHIG LPSTTQNINP ANTKPDYLTS TPLQGQYWIP SPAQILIGPT 120 QFSCSVCNKM FNRFNNMQMH MWGHGSQYRK GAESLRGVKP ASSMLRLPCY CCAEGCKNNI 180 DHPRSRPLKD FRTLQTHYKR KHGAKPFGCR KCGKPFAVRG DWRTHEKNCG KLWFCICGSD 240 FKHKRSLKDH VRAFGDGHAP HTVEETAPLS VLSDGERESE SKGRCEKMQT NREMKAKVLA 300 FNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-122	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV93842