PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV93854

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 105aa MW: 12151.9 Da PI: 8.6274

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV93854	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	75.8	7.7e-24	38	105	1	68
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAear 68 aCaaC++l++kC+kdCvlapyfp e++k++ +vhk+ G + ++k+l++l e+er++a++s +eA ++ OIV93854 38 ACAACRHLKKKCKKDCVLAPYFPTEKTKQYFIVHKVLGYNIMTKMLSNLVEQERNEAVESFQWEAMMW 105 7****************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 105 aa Download sequence
MPPPPSASHS HPSPYSTTSM VRYTNKEEGE ENNASRHACA ACRHLKKKCK KDCVLAPYFP 60 TEKTKQYFIV HKVLGYNIMT KMLSNLVEQE RNEAVESFQW EAMMW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06280.1	1e-19	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV93854