PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV93860
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family Whirly
Protein Properties Length: 228aa    MW: 25214.8 Da    PI: 10.2255
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV93860genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly190.23.2e-59501861137
    Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpd 101
               svyk+kaa+++ + +ptf++l sg+++++r+G++++ ++ a++ rkydWe++q+falsatev++l+ +++++sceffhdp+ k+sn+G+vrk+l+++P+++
  OIV93860  50 SVYKGKAAFSLTPSLPTFTKLHSGAVVVDRRGSIMVIFMHAIGDRKYDWENRQRFALSATEVGSLLTMGPQDSCEFFHDPSIKSSNAGQVRKSLSIKPHAN 150
               79*************************************************************************************************** PP

    Whirly 102 GsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137
                 G+f+nl+v n+l++++e fsvPv+ aefav++++
  OIV93860 151 SNGYFMNLTVVNNLLNTKEFFSVPVTAAEFAVMKTA 186
               **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MLKLHRMLAS SRHGLLDKAI SFNKPSVTHH FSTSSHATGY NSNRILAPYS VYKGKAAFSL  60
TPSLPTFTKL HSGAVVVDRR GSIMVIFMHA IGDRKYDWEN RQRFALSATE VGSLLTMGPQ  120
DSCEFFHDPS IKSSNAGQVR KSLSIKPHAN SNGYFMNLTV VNNLLNTKEF FSVPVTAAEF  180
AVMKTACSFA LPHIMGWDKM THQQSTGGTV GLQSKVVGQQ VFESEWDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.18e-79Whirly family protein