PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV93880

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 220aa MW: 25548.5 Da PI: 5.9482

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV93880	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.5	1.3e-19	39	90	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +f++eq++ Le++Fek++ + +++ +LA++lgL +qV +WFqNrRa++k OIV93880 39 KRFSDEQIKSLESVFEKDSRLEPRKKLQLARELGLHPKQVAIWFQNRRARWK 90 68*************************************************9 PP
2	HD-ZIP_I/II	120.2	1.1e-38	38	128	3	93
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +r+s+eq+k+LE+ Fe++++Lep++K +lareLgl+p+qva+WFqnrRAR+k+kqlE+dy+ L+++yd+l+++ e+L+ke+++L +l++ OIV93880 38 TKRFSDEQIKSLESVFEKDSRLEPRKKLQLARELGLHPKQVAIWFQNRRARWKSKQLERDYNILRSNYDNLASKFEALKKEKQALLVQLQK 128 69***********************************************************************************999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MLDHMEYTYS AEASAEAETY SSTTPSSSTM RKKKNKNTKR FSDEQIKSLE SVFEKDSRLE 60 PRKKLQLARE LGLHPKQVAI WFQNRRARWK SKQLERDYNI LRSNYDNLAS KFEALKKEKQ 120 ALLVQLQKVK DIIDKRKPQE QAQSSSSKQV KAANSMVSEA ENGDTSIKLE YFGIEEEPGL 180 LNFFENPEGS LTSPEEWSTF DSDDLLAQST SDLQWWDFWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	85	93	RRARWKSKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	8e-57	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIV93880