PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV94087

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GATA

Protein Properties

Length: 508aa MW: 56032.9 Da PI: 6.5688

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94087	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	50	4e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ OIV94087 7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41 **************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MGKEGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAETDSDDQR 60 VSRVKSLSLN KNKEVKVLKR KAGQNDYAVS GKFDPDYNQG SRKIVDEDTS NRSSSGSAVS 120 NSESCVQFGG TYASDLTGPA QSVVWEATVP SKKRTCGGRP KPSSVEKLTK DLYAILHEQQ 180 SYFSASSEED LIFESETPMV SVEIGHGSIL IRHPSTIAHE EESEASSLSV DNKQCQMSEA 240 YSCSGSIPVD KSPLERLQFL GNHDSPLGLI NLDDIANYEQ YMNNLTNDEQ QQLLKYLPEV 300 DSAELPNSLK IMFDSSQFKE NLTYFQQLLG EGVFDIFMFR AKPEDCKTLK RFALSNLLKS 360 KWVEQYNFLK RCKDRAGKSV AMGSPGMASS NVVNVKRLRD GQNKKLPELK KTMKSPKSMI 420 IKAGCEGKEV AEDGSCFGAK SLFALPHDHS SHMMDSLNFD YENSDQDLLL DVPSNSSFPQ 480 AELLHPAPSF GAQAGCSSSS IYSHVAHP

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MGKEGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAETDSDDQR  60
VSRVKSLSLN KNKEVKVLKR KAGQNDYAVS GKFDPDYNQG SRKIVDEDTS NRSSSGSAVS  120
NSESCVQFGG TYASDLTGPA QSVVWEATVP SKKRTCGGRP KPSSVEKLTK DLYAILHEQQ  180
SYFSASSEED LIFESETPMV SVEIGHGSIL IRHPSTIAHE EESEASSLSV DNKQCQMSEA  240
YSCSGSIPVD KSPLERLQFL GNHDSPLGLI NLDDIANYEQ YMNNLTNDEQ QQLLKYLPEV  300
DSAELPNSLK IMFDSSQFKE NLTYFQQLLG EGVFDIFMFR AKPEDCKTLK RFALSNLLKS  360
KWVEQYNFLK RCKDRAGKSV AMGSPGMASS NVVNVKRLRD GQNKKLPELK KTMKSPKSMI  420
IKAGCEGKEV AEDGSCFGAK SLFALPHDHS SHMMDSLNFD YENSDQDLLL DVPSNSSFPQ  480
AELLHPAPSF GAQAGCSSSS IYSHVAHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-141	GATA family protein

Link Out ? help Back to Top
Ensembl	OIV94087