PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV94219

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 455aa MW: 51444.8 Da PI: 8.2649

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94219	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00089	404	426	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k F++ L H r+H OIV94219 404 HECPICYKIFKSGQALGGHKRSH 426 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MEEKKFVCKF CSKKFPCGKS LGGHIRTHMS EQRNNSINNN DAECDNLNLD VVRMKQKRDL 60 WCEAGYGLRE NPKKTMRFVH SKAILEQQQE EKFCKECGKG FPSLKALCGH MACHSEKQKL 120 VMDSHSDTEE SSDISKHPRR SKRMKFKTLC ISNDQRYSSS VSEVDQEQEE VARCLMLLSN 180 DSSHKGGFAL IDESSENNLV VVEEAKSSSV DLRNGVKNVN KFVSNGYDLV EKKELKLKSA 240 DNSDSGYYRY DPQTKMAKSD ASKDEFKSEF DDYDVESGKM LNMNKERSKY TVTLFKKSVN 300 KDLNYDGTGG TTSRFDSMKI ANYDSFNHSK KMTNGFANDE IYETGERGLK YESLAYDSTY 360 ESDESSSDTD SFPAPKSHSS KVLNGKKCSK AKKKKLKSKK SKEHECPICY KIFKSGQALG 420 GHKRSHFIGG SEENTVIINQ GPCLIDLNLP APIDE

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MEEKKFVCKF CSKKFPCGKS LGGHIRTHMS EQRNNSINNN DAECDNLNLD VVRMKQKRDL  60
WCEAGYGLRE NPKKTMRFVH SKAILEQQQE EKFCKECGKG FPSLKALCGH MACHSEKQKL  120
VMDSHSDTEE SSDISKHPRR SKRMKFKTLC ISNDQRYSSS VSEVDQEQEE VARCLMLLSN  180
DSSHKGGFAL IDESSENNLV VVEEAKSSSV DLRNGVKNVN KFVSNGYDLV EKKELKLKSA  240
DNSDSGYYRY DPQTKMAKSD ASKDEFKSEF DDYDVESGKM LNMNKERSKY TVTLFKKSVN  300
KDLNYDGTGG TTSRFDSMKI ANYDSFNHSK KMTNGFANDE IYETGERGLK YESLAYDSTY  360
ESDESSSDTD SFPAPKSHSS KVLNGKKCSK AKKKKLKSKK SKEHECPICY KIFKSGQALG  420
GHKRSHFIGG SEENTVIINQ GPCLIDLNLP APIDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	4e-49	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV94219