PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV94452

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 696aa MW: 76905.3 Da PI: 6.2471

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94452	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.1	2.7e-12	515	560	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI +L OIV94452 515 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYITEL 560 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 696 aa Download sequence
MNLWTDDNSS VMEAFMSTTS SSDLSSLWPP PTPSLPPQQP PPPPHQQPLF NQDTLQQRLQ 60 ALIEGHATHI WTYAIFWQSS YDYSSSSTLL AWGDGYYKGD DDKSKSKSKP NNNNTKKTSS 120 AEQNHRKKVL RELNSLISGS SNENDTVDEE VTDTEWFFLV SMTQSFVNGS ELPGQAFFNS 180 TPVWVTGSER LAGSACERAR QAQVFGLQTI VCIPAANGVV ELGSTEMVFQ NPDLMNKVRF 240 LFNFNNNNNN HDVGSWPFTA STTTDQGEND PSSLWLSDPE IRDSVNTNNT VVAPVTGDVS 300 VSIPSLNNSH RNSHHNMVVP KTTQLETPGS STLTETPSAV NFPNRSTQQK QNQQQQQSLF 360 SKELNFSAYG FEGNGVKNGG NQHSHHSLKP ESGEILSFGE SKKSSYINTN ENMSHFFSGQ 420 SQFVAAAPAA EENSKKRRSQ TSRSSNDDGM LSFTSGVVLP ASTSNMRSSG GGDSDHSDIE 480 ASIVKDPEST IVVEPEKRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPN 540 VSKMDKASLL GDAISYITEL KSKLQNLESD KDGLKKQLDT VKKELEKTTK DSDALPPLDK 600 ELKMLNSVGS GKLIDLDIDV KIIGWDAMVR IQCSKKNHPA ARLMAALMEL DLDVHHASVS 660 VVNDLMIQQA TVKMGSRFYT QEQLHVALSS KFGDGQ

Sequence ? help Back to Top

Protein Sequence Length: 696 aa Download sequence

MNLWTDDNSS VMEAFMSTTS SSDLSSLWPP PTPSLPPQQP PPPPHQQPLF NQDTLQQRLQ  60
ALIEGHATHI WTYAIFWQSS YDYSSSSTLL AWGDGYYKGD DDKSKSKSKP NNNNTKKTSS  120
AEQNHRKKVL RELNSLISGS SNENDTVDEE VTDTEWFFLV SMTQSFVNGS ELPGQAFFNS  180
TPVWVTGSER LAGSACERAR QAQVFGLQTI VCIPAANGVV ELGSTEMVFQ NPDLMNKVRF  240
LFNFNNNNNN HDVGSWPFTA STTTDQGEND PSSLWLSDPE IRDSVNTNNT VVAPVTGDVS  300
VSIPSLNNSH RNSHHNMVVP KTTQLETPGS STLTETPSAV NFPNRSTQQK QNQQQQQSLF  360
SKELNFSAYG FEGNGVKNGG NQHSHHSLKP ESGEILSFGE SKKSSYINTN ENMSHFFSGQ  420
SQFVAAAPAA EENSKKRRSQ TSRSSNDDGM LSFTSGVVLP ASTSNMRSSG GGDSDHSDIE  480
ASIVKDPEST IVVEPEKRPR KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYALRAVVPN  540
VSKMDKASLL GDAISYITEL KSKLQNLESD KDGLKKQLDT VKKELEKTTK DSDALPPLDK  600
ELKMLNSVGS GKLIDLDIDV KIIGWDAMVR IQCSKKNHPA ARLMAALMEL DLDVHHASVS  660
VVNDLMIQQA TVKMGSRFYT QEQLHVALSS KFGDGQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	497	505	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-162	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIV94452