PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV94616

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 280aa MW: 31823 Da PI: 8.4862

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94616	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.8	8.3e-05	183	204	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC +Cgk+F+++ L +H + + OIV94616 183 KCDKCGKTFRSSRALGSHKSIC 204 7*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MERHKCKLCS RTFVNGRALG GHMKGHFATL PLPPKPEPVT THCDDEYASL CSEEDHEEER 60 EEKDMVYGLR EKPKKSFRLA DPKFSFQSDT VVQDRESETE SKNPTRKRSK RNRKCMEPTN 120 KGKLSLVELS PVSSVSETWP EEDVAMCLMM LSRDTWKKKN IMEEQQQKVK PKGLKRVNGK 180 HNKCDKCGKT FRSSRALGSH KSICYSDDDD KSKIFECPFC YKVFGSGQAL GGHKRSHLIP 240 SSSSNANNHS TTSPKFKDTF IDLNFPPQPE EDDLSVVSDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	8e-42	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV94616