PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV94623

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 289aa MW: 32642.8 Da PI: 7.1294

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94623	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.7	9.9e-19	129	183	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ +++ LAkklgL rqV vWFqNrRa+ k OIV94623 129 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKKLGLRARQVEVWFQNRRARTK 183 788899***********************************************98 PP
2	HD-ZIP_I/II	125.9	1.8e-40	129	216	1	88
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rlsk+q+++LEesF+e+++L+p++K +la++Lgl++rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr OIV94623 129 RKKLRLSKDQSAILEESFKEHNTLNPKQKLALAKKLGLRARQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR 216 69*************************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MTTVENEDLG LSLSLSFPHN TPNHIQLNLM SSPICNPQKP SWINDPFTSS DRDSETCKGE 60 RESFLQGIDV NRLPSVVDCE DEAGISSPNS TISSVSGKRS EREPNGEEND MDRFFSRGIS 120 DEEDAETARK KLRLSKDQSA ILEESFKEHN TLNPKQKLAL AKKLGLRARQ VEVWFQNRRA 180 RTKLKQTEVD CEFLKRCCEN LTEENRRLQK EVQELRVLKL SSHFYNHMTP PTTLTMCPSC 240 ERVAVPPSAV DFATRHHPMA PTRARPISVV GPWASGAAPI PFDVLRPRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	178	186	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16780.1	1e-91	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIV94623