PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV94743

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 306aa MW: 33965 Da PI: 6.6506

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV94743	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	136.9	7.4e-43	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrrkC+++Cv+apyfp ++p++fa+vhk+FGasnv k+l++l +reda++sl+yeAear+rdPvyG+vg+i+ lq++l+q + el+ +k+e OIV94743 7 PCAACKFLRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKILNELTAAQREDAVKSLAYEAEARLRDPVYGCVGLISVLQHRLRQIQMELNNAKKE 106 7**********************************************************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MSSSNSPCAA CKFLRRKCTQ ECVFAPYFPP DNPQRFAYVH KVFGASNVAK ILNELTAAQR 60 EDAVKSLAYE AEARLRDPVY GCVGLISVLQ HRLRQIQMEL NNAKKELATY IGPQGLPTTA 120 ILQQHPSAAA YPFTSSVFPV TTAAHGGQLL LGEPQHPQHQ ILEAQQLAAA MAAREQQEMF 180 RGFEHQQQQQ QPEFLRFNGG GFDLDSVSGG GFSQQVSPAA PVSDDQLSPS LTLGSFENPF 240 HHMQQPQQGE PHAHVHSHHL PLEAQLLLSS PHQEKQEQQQ QTQQSQLQHH QQQLERDECR 300 SVGPSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	3e-68	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV94743