PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV94794
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GATA
Protein Properties Length: 243aa    MW: 27272.9 Da    PI: 6.8737
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV94794genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA64.11.6e-20126160135
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
               C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  OIV94794 126 CANCDTTSTPLWRNGPQGPKSLCNACGIRFKKEER 160
               ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MMHRSCNDSY QGHVMGHCTC GMFHSQTSSF SMLFSMPNHK PYDYDQHEPD MCSYNATPSS  60
SNVDCTLSLG TPSTRFTEDE EKRSCRPVSN FCWDLVQPNH STQSQTKSRK DSSSNNTNDS  120
LLPRRCANCD TTSTPLWRNG PQGPKSLCNA CGIRFKKEER RASAAATPTA ASGGVVDSSQ  180
MYSHHNNSWY AHSQSQKMQC LSPAMGNDFR FMDDGDQDSD NGIPFLSWRL NVTDRTNFVH  240
DFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.11e-48GATA family protein