PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV95116
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family NF-YC
Protein Properties Length: 248aa    MW: 28001.8 Da    PI: 6.6036
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV95116genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC1788.6e-56671701101
     NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 
               ql++fw++q   iek+tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdivpr
  OIV95116  67 QLQQFWANQyqeIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR 167
               89******99999**************************************************************************************** PP

     NF-YC  99 del 101
               ++l
  OIV95116 168 EDL 170
               987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MDHQGHGQNQ NMGVVGSGTQ LPYGSNPYQQ SQMMGAPGSV VTSSGNMQPT LAYQHIHQQQ  60
QQQLQQQLQQ FWANQYQEIE KVTDFKNHSL PLARIKKIMK ADEDVRMISA EAPVIFARAC  120
EMFILELTLR SWNHTEENKR RTLQKNDIAA AITRTDIFDF LVDIVPREDL KDEVLASIPR  180
GTMQVAGPAD SLPYMYMPPQ HAPQAGAPGV IMGKPVMDPN MYAQQPHPYM APQMWPQPKD  240
QRPSSPDH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1140146RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.34e-83NF-YC family protein