PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV95230
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 232aa    MW: 26665.3 Da    PI: 9.104
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV95230genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF50.52.6e-161151343
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
              i ++s+r++t+ kR++g++KK  E+S+LC++e++ ii+ s+
  OIV95230 11 IASDSKRNTTYKKRKHGLIKKMDEISTLCGIEACAIIYNSN 51
              7899*********************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MAGKKLNLGY IASDSKRNTT YKKRKHGLIK KMDEISTLCG IEACAIIYNS NEPQPEVWPS  60
HLGAQRVLYK FSRVSQMVQS KKMFNQESFL NQSIMKAQEK LKKLRNENRK KEMDLLMYQC  120
LSSGYLVNNV SMANLNGLSW RIDQTLKEIE RNVTKDQPQE RSPMFTNGGE VINEENENVA  180
VNDRFKGMMQ NNIDVTQNQN WCIDSANGGG NEMLRYGELN NSNGVWNDIF FT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-33M-type_MADS family protein