PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV95470

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

NF-YC

Protein Properties

Length: 284aa MW: 31565 Da PI: 4.9703

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV95470	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	61	2.5e-19	6	86	18	98
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 ++++P arikki+++dedv +i+ +Pvl+ska elf+ +l r++ + + +t++ ++ +v++ ++fdfl div r OIV95470 6 DTRFPAARIKKIMQTDEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVSR 86 5789**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MKKKLDTRFP AARIKKIMQT DEDVGKIALA VPVLVSKALE LFLQDLCDRT YEITLQRGAK 60 TMNALHLKHC VQSYNVFDFL RDIVSRVPDY GHGHSEAGVD DRALSKRRKA AAGDDCNDSD 120 EEAKRIKMLE LGHTGSTGRG RGRGRGRGHG RGARTIERET HHQQVESEPF TFVQPNSKDV 180 PNTSMAIDNG PESKELSKEN IPVPEENTQS LHNIDLNANL NENEDKNSCA AAQASLSEPA 240 TETKHEEIPG WSLADVEMMA IDTTQLANLG SRQEEDEEDY DEEG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	148	RGRGRGRGRG
2	143	152	RGRGRGRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12480.1	2e-76	NF-YC family protein

Link Out ? help Back to Top
Ensembl	OIV95470