PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV95471

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 261aa MW: 28767.1 Da PI: 7.0992

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV95471	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00077	84	104	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ C++ Fs++ L H++ H OIV95471 84 CNFCKRKFSTSQALGGHQNAH 104 ******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MATKGFEPCP SESSASMSVT SNHEIDHNAY CNSDSHTGLD FVKLLKDGDL VGGSIVELDL 60 FNNNNEAKYQ NIEEKTLESR TFLCNFCKRK FSTSQALGGH QNAHKQERAI AKRRQNVDTN 120 TLGLPHFPYY PFTSLSTQPP YPLYRSNNNR AIGLGVPSYP WTTPGLRYGP NGDGWASPMQ 180 GMPNQSLPLD RLNSIEGLQA HDHSIVGPKP HFGDSLTNVA TTSSSSAIKM ITMTNKDDHH 240 SNKEELTSIP KCSVLDLSLK L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01860.1	1e-19	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV95471