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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIV95581 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | WOX | ||||||||
| Protein Properties | Length: 178aa MW: 20517.1 Da PI: 8.8401 | ||||||||
| Description | WOX family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 63.4 | 3.2e-20 | 25 | 86 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++ R+++t+eq++ L elF + r+p+++++++++++l +++ ++V++WFqN++a+e++
OIV95581 25 KCGRWNPTTEQVNLLTELFSSgLRTPTTAQIQKISTQLsfygKIESKNVFYWFQNHKARERQ 86
568*****************99**************************************97 PP
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| 2 | Wus_type_Homeobox | 111.5 | 4.4e-36 | 25 | 88 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++ RW+Pt+eQ+++L+el++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+
OIV95581 25 KCGRWNPTTEQVNLLTELFSSGLRTPTTAQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKR 88
678***********************************************************95 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 178 aa Download sequence |
MEENMSGFCI RGASVSANSR STGTKCGRWN PTTEQVNLLT ELFSSGLRTP TTAQIQKIST 60 QLSFYGKIES KNVFYWFQNH KARERQKRRK VSFDDDKDVN IGRENARILS TQNFAYQVSE 120 PERLTQTLEL FPLNSFGGES EPQKLRVHAN ECRDTTMFSY KMGEQMDHPP LDLRLSFM |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G11260.1 | 7e-58 | WOX family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | OIV95581 |




