PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV95617

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 224aa MW: 25619.2 Da PI: 8.735

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV95617	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	59	81	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H+++H OIV95617 59 YSCNFCKRDFRSAQALGGHMNVH 81 99*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MEESEYMIWM KRKQILKSHI QAPIVIGACN NNNNSWEEKA FAEDAKRILG GCIWPPRSYS 60 CNFCKRDFRS AQALGGHMNV HRRDRARLKQ GLSPYHQSKE ALHRFHHCQK IHPKSLSNSQ 120 FSSVNEREEI FNDLGCNDYV ETSLSVGLNS VFGQKSSPNG SCDEEAMSYK RPKIYIPSMP 180 VFIKPCSKDR SMAFKSAEEF VLGLKPGMED LDLELRLGES QKVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06070.1	1e-28	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV95617