PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV95656
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 159aa    MW: 18312.3 Da    PI: 10.2836
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV95656genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF52.46.6e-171051243
              ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
    SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
              +i n+s r+ t+ +R++g+lKK +ELS+LC++e++ i++s+ 
  OIV95656 10 FILNDSARKATYNRRKKGLLKKVNELSTLCGIEACAIVYSPY 51
              789*************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MTGKKVKLAF ILNDSARKAT YNRRKKGLLK KVNELSTLCG IEACAIVYSP YEHQPEVWPS  60
PSGVQRVFAK FNNIPESEKS KKMVNQEAFL NQRILKSGKQ AKNLRRENRK LEITLLMFHC  120
LSVGNILHNN MSTIDLNDLA WLIDQNLKEI DRKIETLEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-58M-type_MADS family protein