PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV95713

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 256aa MW: 28097.2 Da PI: 5.5074

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV95713	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.0002	104	126	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H OIV95713 104 FPCNYCQRKFYSSQALGGHQNAH 126 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MKPIFDLEVE ATAEYESEFS SHVAFNINET TTGPCSDTFT NSSNVTNPIE IHPLSDAISL 60 ELTLNFNSNE IGARDLIGLS FSSTSESSNE LASQTTAATI PRLFPCNYCQ RKFYSSQALG 120 GHQNAHKRER TSAKRAMRMG LISERYASLA SLPLHGSFGS LGIKTHSSLH HGFSDFSPAI 180 RPTEIKSNAR VEQGYLSLPI FLEDDEAELL WPGSFHQKSD SHQNFLLTAG SSSLSFSEVH 240 PPLDIEKSAP ELTLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66140.1	8e-46	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV95713