PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV95714
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 236aa    MW: 26788 Da    PI: 9.7806
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV95714genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF50.52.6e-161050242
              ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
    SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
              +i n+  r+ t+ kR++g++KK  ELS+LC+++++ i++s+
  OIV95714 10 FIVNDASRKATYKKRKKGLMKKVGELSTLCGIDACAIVYSP 50
              789*************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MTRKKVKLAF IVNDASRKAT YKKRKKGLMK KVGELSTLCG IDACAIVYSP YDPQPEVWPS  60
PIGVQRVLAK FRRMPELEQS KKMVNQDSFL RQRILKAKEQ VKKQSKDNRE KEITQVMFQC  120
LSAGKILPNI SMVDLNDLAW LIDQNLKDIN RRIETLTKKA QSQAQIVAPV VPDVAAKIEE  180
KEEGCHGNGL DLDMNIDAME KQNWFTNLLN NGGGDEALPF GDVNHSNGFW PNSFFH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAFIVNDASRKATYKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.18e-66M-type_MADS family protein