PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV95809

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SBP

Protein Properties

Length: 761aa MW: 85378.6 Da PI: 6.9389

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV95809	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	108	6.4e-34	97	175	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETT.EEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsg.leqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv+ Ce+d+se+k yh+rh+vC ++ a++vl++g + +r+CqqC++fh l +fDe+krsCrr+L++hn+rrr+k+a OIV95809 97 RCQVPTCEVDISELKGYHKRHRVCLSCASAATVLLHGdEPNRYCQQCGKFHILLDFDEGKRSCRRKLERHNKRRRRKAA 175 6**************************999997761569********************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 761 aa Download sequence
MNTNDPSSSP IWDLTELLNF HLDDIQISPS VDHHDPLLPP SPDNQKIRKR DPRLTCTNFL 60 AGHVPCACPE LDAKLDDEGL PGKKRVRTAR GSVGIVRCQV PTCEVDISEL KGYHKRHRVC 120 LSCASAATVL LHGDEPNRYC QQCGKFHILL DFDEGKRSCR RKLERHNKRR RRKAADSEAA 180 AGHELQHVTQ NEDFSYDGEA GKDCSNSSGE INEKEVSPDH EDEPLAIPCS APDTQNVNRD 240 DIPSLVASGE TQLSSGKDVS NISNTPSYCD NKSAYSSMCQ TGRISFKLYD WNPAEFPRRL 300 RHQIFQWLAS MPLELEGYIR PGCTILTTFI AMPKTMWINL LDDPMHYVCD LVAPGKMLSG 360 RGSALVHLDD MIFRVMKDGT SVMKVEVNIQ APRLHYVHPT YFEAGKPMEF VACGSNLLQP 420 KFRLLVSFSG KYQKYEYCVQ SPHNWTGDNV SCAFDNQLYK IHIPHTEESL FGPAFIEVEN 480 ESGLSNFIPV LIGDKEICIE MKRLQQKLDL SLLSKQFQSS AVGSVCSSCQ AFALRHTSSS 540 DLLVDIAWLL KDPTSENFDR VMTASQIQRY CYLLDFLICN DSTIILHKIL PNLMILTESM 600 ESNVVANRMS GIDMTHLLKC MHNARDVVYH KQHKGGVIVH SEMEGFKVAQ SCFQDYMPSV 660 AINSQGIMST SDARLGVSRS STANDRTERI PLLKRDIIMN MEELPRTCSH RYLPRGFMSS 720 RPAIFVIASL AVCLGLCVAV LHPGKVSELA VSIRRCLFNN S

Sequence ? help Back to Top

Protein Sequence Length: 761 aa Download sequence

MNTNDPSSSP IWDLTELLNF HLDDIQISPS VDHHDPLLPP SPDNQKIRKR DPRLTCTNFL  60
AGHVPCACPE LDAKLDDEGL PGKKRVRTAR GSVGIVRCQV PTCEVDISEL KGYHKRHRVC  120
LSCASAATVL LHGDEPNRYC QQCGKFHILL DFDEGKRSCR RKLERHNKRR RRKAADSEAA  180
AGHELQHVTQ NEDFSYDGEA GKDCSNSSGE INEKEVSPDH EDEPLAIPCS APDTQNVNRD  240
DIPSLVASGE TQLSSGKDVS NISNTPSYCD NKSAYSSMCQ TGRISFKLYD WNPAEFPRRL  300
RHQIFQWLAS MPLELEGYIR PGCTILTTFI AMPKTMWINL LDDPMHYVCD LVAPGKMLSG  360
RGSALVHLDD MIFRVMKDGT SVMKVEVNIQ APRLHYVHPT YFEAGKPMEF VACGSNLLQP  420
KFRLLVSFSG KYQKYEYCVQ SPHNWTGDNV SCAFDNQLYK IHIPHTEESL FGPAFIEVEN  480
ESGLSNFIPV LIGDKEICIE MKRLQQKLDL SLLSKQFQSS AVGSVCSSCQ AFALRHTSSS  540
DLLVDIAWLL KDPTSENFDR VMTASQIQRY CYLLDFLICN DSTIILHKIL PNLMILTESM  600
ESNVVANRMS GIDMTHLLKC MHNARDVVYH KQHKGGVIVH SEMEGFKVAQ SCFQDYMPSV  660
AINSQGIMST SDARLGVSRS STANDRTERI PLLKRDIIMN MEELPRTCSH RYLPRGFMSS  720
RPAIFVIASL AVCLGLCVAV LHPGKVSELA VSIRRCLFNN S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	160	172	RRKLERHNKRRRR
2	168	173	KRRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.2	0.0	SBP family protein

Link Out ? help Back to Top
Ensembl	OIV95809