PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV96014

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 190aa MW: 20521.8 Da PI: 8.3376

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV96014	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	140.8	4.3e-44	14	113	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrrkC +dCv+apyfp ++++kfanvhk+FGasnv k+l++lp ++r da+ss+vyeA+ar+rdPvyG+vg+i++lqq+++ l+++lal+++e OIV96014 14 PCAACKLLRRKCGQDCVFAPYFPPNEAHKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGTISSLQQHIDLLQTQLALAQAE 113 7**********************************************************************************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MKEGCGRKHG AATPCAACKL LRRKCGQDCV FAPYFPPNEA HKFANVHKVF GASNVNKMLQ 60 DLPMHQRGDA VSSMVYEANA RVRDPVYGCV GTISSLQQHI DLLQTQLALA QAEVVHLRVS 120 QTRCIPNLVL SPTNSGSPSS KIMGSHANPV FDMDMVVDQC SFDLVVIVAG LPWCRIGGAV 180 AEASARLVNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	8e-64	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV96014