PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV96366

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 248aa MW: 26858.1 Da PI: 8.5041

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV96366	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00028	96	118	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k F++ L H +H OIV96366 96 YKCSVCNKAFPSYQALGGHKASH 118 9***********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MAMEALKSPT FAATTTATTT SPLKFDEDNL HYLESAPWAK RKRSKRSRMD HHHHHHRSCT 60 EEEYLALCLI MLSADKTHTI PAPSPPLATE ESKLSYKCSV CNKAFPSYQA LGGHKASHRK 120 LAGANGGEDQ PTSSAVTTTS ATTASSKGGN KTHECSICHK SFPTGQALGG HKRCHYDGGA 180 GNSSVVTASE GVGSTHTVSH SHQRDFDLNL PAFPDFPTKF LVEDEVSSPH PLKKPRLLTI 240 PSIQISQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	8e-51	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV96366