PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV96394

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GRF

Protein Properties

Length: 609aa MW: 66774 Da PI: 7.1603

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV96394	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.7	2.4e-24	211	255	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e OIV96394 211 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEG 255 79****************************************985 PP
2	QLQ	61.8	1.8e-21	142	177	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT++Q+++L++Q+l+yKy++an+PvP++Ll +i+k OIV96394 142 LFTPSQWMELEHQALIYKYIIANVPVPSHLLIPIKK 177 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MDIGAVSLDG LGGSEFVSDP ETKHNKWYGF GFLKHERSGT TTEDDLRSSK LAKTIDDMSL 60 VSKAMLFKNN NNSLLRSNAT LFSDGQQMLS FSSPKSDSLL VDKSSQNPTF PFSYHPLSTY 120 NKNTAGYSSE SMHGILAGTR GLFTPSQWME LEHQALIYKY IIANVPVPSH LLIPIKKALD 180 SAGFCNFSTG LLRPTALGWG GFHLGFSNNT DPEPGRCRRT DGKKWRCSRD AVVDQKYCER 240 HMNRGRHRSR KPVEGQSGHA LTGTTSTTNT TNSSITTTSK QMMMPDNNAV VPRSSASNNL 300 AFTQQHEPKN IHTLASDTPA PNNINRMFMN KENGGEKIPN ADALPMLPPT LELNPKENPF 360 MMHKQQFQYE ESSRNEFGFV TSDSLLNPSQ KSSNLQTSSR SFGSSQNQTN QETDSQHFLR 420 HFIDDWPKTQ SNSSGLAWPE LHMQSDRTEL SISVPMTSTD FMSSTSSPSN EKVTLSPLRL 480 SKELDPIQMG LGVGNALSES NNTREANWIP ITWESSMGGP LGEVLNVSNN NNNNTSDHSA 540 NNNSSSALNL MNDGWDNSPP LGSSPTGVLQ KTIFVSLSNS SAGSSPRAEK KTQEGATLCN 600 HLIGSTLGN

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MDIGAVSLDG LGGSEFVSDP ETKHNKWYGF GFLKHERSGT TTEDDLRSSK LAKTIDDMSL  60
VSKAMLFKNN NNSLLRSNAT LFSDGQQMLS FSSPKSDSLL VDKSSQNPTF PFSYHPLSTY  120
NKNTAGYSSE SMHGILAGTR GLFTPSQWME LEHQALIYKY IIANVPVPSH LLIPIKKALD  180
SAGFCNFSTG LLRPTALGWG GFHLGFSNNT DPEPGRCRRT DGKKWRCSRD AVVDQKYCER  240
HMNRGRHRSR KPVEGQSGHA LTGTTSTTNT TNSSITTTSK QMMMPDNNAV VPRSSASNNL  300
AFTQQHEPKN IHTLASDTPA PNNINRMFMN KENGGEKIPN ADALPMLPPT LELNPKENPF  360
MMHKQQFQYE ESSRNEFGFV TSDSLLNPSQ KSSNLQTSSR SFGSSQNQTN QETDSQHFLR  420
HFIDDWPKTQ SNSSGLAWPE LHMQSDRTEL SISVPMTSTD FMSSTSSPSN EKVTLSPLRL  480
SKELDPIQMG LGVGNALSES NNTREANWIP ITWESSMGGP LGEVLNVSNN NNNNTSDHSA  540
NNNSSSALNL MNDGWDNSPP LGSSPTGVLQ KTIFVSLSNS SAGSSPRAEK KTQEGATLCN  600
HLIGSTLGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	2e-90	GRF family protein

Link Out ? help Back to Top
Ensembl	OIV96394