 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | OIV96541 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
|
||||||||
| Family | bZIP | ||||||||
| Protein Properties | Length: 336aa MW: 36448 Da PI: 4.8285 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 43.7 | 5.8e-14 | 168 | 219 | 4 | 55 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55
+kr rrk +NRe+ArrsR+RK+a+++eLe v++L+ eN +L k+ + +++
OIV96541 168 VKRLRRKVSNRESARRSRRRKQAQLAELELQVEKLKLENATLYKQFTHASQQ 219
79****************************************9988776666 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 336 aa Download sequence |
MESAPQSLLP PPPIFPGFFK RLSELDIYDD QWYNELANDV DDVKPDYFRF TGNGEMIGGV 60 CSDDLTPAAA AIQNSTDAVT AFSTCGDTII GSQNGTPKHS NMSATIDYQA SNCGTGNDLG 120 TAVGSPVSAN KPNSSENQTK GATSGSSEQS DEDDEFGPCE QSTNPLDVKR LRRKVSNRES 180 ARRSRRRKQA QLAELELQVE KLKLENATLY KQFTHASQQF RDADTNNRVL KSDVEALRAK 240 VKLAEDMVTR SSFTLNNQFL QTQSQLSTPP QLNTTNLRAM AHVSPTITVH GNDASYGGVT 300 VGGQNSTHGL GNLDIAYNNV NNGVLSDAVS SVTMWQ |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 172 | 188 | RRKVSNRESARRSRRRK |
| 2 | 182 | 189 | RRSRRRKQ |
| 3 | 184 | 189 | SRRRKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G24800.1 | 4e-35 | bZIP family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | OIV96541 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|